IL_8JSG_073

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GUU*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSG_073 not in the Motif Atlas

Homologous match to IL_4LFB_061

Geometric discrepancy: 0.4216

The information below is about IL_4LFB_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8JSG|1|g|G|1423
8JSG|1|g|U|1424
8JSG|1|g|U|1425
*
8JSG|1|g|G|1475
8JSG|1|g|A|1476
8JSG|1|g|U|1477

Current chains

Chain g

16S ribosomal RNA

Nearby chains