IL_8OI5_118
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 8OI5|1|1|U|3028, 8OI5|1|1|U|3030
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_118 not in the Motif Atlas
- Homologous match to IL_8C3A_127
- Geometric discrepancy: 0.0463
- The information below is about IL_8C3A_127
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
8OI5|1|1|U|3026
8OI5|1|1|U|3027
8OI5|1|1|U|3028
8OI5|1|1|U|3029
8OI5|1|1|U|3030
8OI5|1|1|G|3031
*
8OI5|1|1|C|3056
8OI5|1|1|G|3057
8OI5|1|1|A|3058
8OI5|1|1|A|3059
8OI5|1|1|G|3060
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 7
- 60S ribosomal protein L24-A
- Chain AE
- 60S ribosomal protein L31-B
- Chain k
- 60S ribosomal protein L3
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