IL_8OI5_148
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUCAGUAG*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_148 not in the Motif Atlas
- Homologous match to IL_8C3A_006
- Geometric discrepancy: 0.0479
- The information below is about IL_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OI5|1|AS|C|81
8OI5|1|AS|U|82
8OI5|1|AS|C|83
8OI5|1|AS|A|84
8OI5|1|AS|G|85
8OI5|1|AS|U|86
8OI5|1|AS|A|87
8OI5|1|AS|G|88
*
8OI5|1|AS|U|96
8OI5|1|AS|G|97
8OI5|1|AS|A|98
8OI5|1|AS|A|99
8OI5|1|AS|G|100
8OI5|1|AS|C|101
8OI5|1|AS|G|102
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AY
- 60S ribosomal protein L4-B
- Chain BG
- 60S ribosomal protein L13
- Chain BI
- 60S ribosomal protein L15-A
- Chain BL
- 60S ribosomal protein L18-A
- Chain BV
- 60S ribosomal protein L28
Coloring options: