IL_8OI5_153
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GACC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_153 not in the Motif Atlas
- Homologous match to IL_8C3A_011
- Geometric discrepancy: 0.1449
- The information below is about IL_8C3A_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93525.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
8OI5|1|AS|G|176
8OI5|1|AS|C|177
*
8OI5|1|AS|G|238
8OI5|1|AS|A|239
8OI5|1|AS|C|240
8OI5|1|AS|C|241
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BG
- 60S ribosomal protein L13
- Chain BI
- 60S ribosomal protein L15-A
- Chain CC
- Ribosomal protein L29
- Chain CE
- 60S ribosomal protein L37-B
Coloring options: