IL_8OI5_279
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GUAG
- Length
- 6 nucleotides
- Bulged bases
- 8OI5|1|AT|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_279 not in the Motif Atlas
- Homologous match to IL_8C3A_145
- Geometric discrepancy: 0.2133
- The information below is about IL_8C3A_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.3
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
8OI5|1|AT|C|28
8OI5|1|AT|C|29
*
8OI5|1|AT|G|49
8OI5|1|AT|U|50
8OI5|1|AT|A|51
8OI5|1|AT|G|52
Current chains
- Chain AT
- 5S
Nearby chains
- Chain AZ
- Uncharacterized protein CaJ7.0206
- Chain BF
- 60S ribosomal protein L11-B
Coloring options: