IL_8OIN_050
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AUUA*UUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIN_050 not in the Motif Atlas
- Geometric match to IL_3R2D_002
- Geometric discrepancy: 0.187
- The information below is about IL_3R2D_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8OIN|1|B8|A|70
8OIN|1|B8|U|71
8OIN|1|B8|U|72
8OIN|1|B8|A|73
*
8OIN|1|B8|U|92
8OIN|1|B8|U|93
8OIN|1|B8|U|94
8OIN|1|B8|U|95
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BE
- Mitochondrial ribosomal protein L28
- Chain BK
- Mitochondrial ribosomal protein L35
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain BO
- Mitochondrial ribosomal protein L9
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Bg
- mL64
- Chain Bz
- Mitochondrial ribosomal protein L51
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