IL_8OIN_052
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AAG*CUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: AAG,CUU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIN_052 not in the Motif Atlas
- Geometric match to IL_3LA5_001
- Geometric discrepancy: 0.1757
- The information below is about IL_3LA5_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
8OIN|1|B8|A|165
8OIN|1|B8|A|166
8OIN|1|B8|G|167
*
8OIN|1|B8|C|175
8OIN|1|B8|U|176
8OIN|1|B8|U|177
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- uL22m
- Chain BR
- 39S ribosomal protein L13, mitochondrial
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain BZ
- Mitochondrial ribosomal protein L21
- Chain Br
- mL42
- Chain Bs
- 39S ribosomal protein L43, mitochondrial isoform X2
Coloring options: