IL_8OIR_065
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUAAA*UGAAC
- Length
- 10 nucleotides
- Bulged bases
- 8OIR|1|B8|A|581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIR_065 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.0983
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
8OIR|1|B8|G|479
8OIR|1|B8|U|480
8OIR|1|B8|A|481
8OIR|1|B8|A|482
8OIR|1|B8|A|483
*
8OIR|1|B8|U|578
8OIR|1|B8|G|579
8OIR|1|B8|A|580
8OIR|1|B8|A|581
8OIR|1|B8|C|582
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- 39S ribosomal protein L30, mitochondrial
- Chain BP
- 39S ribosomal protein L10, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
Coloring options: