IL_8OIS_033
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*UCAAG
- Length
- 7 nucleotides
- Bulged bases
- 8OIS|1|AA|C|683, 8OIS|1|AA|A|684
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_033 not in the Motif Atlas
- Homologous match to IL_6CZR_155
- Geometric discrepancy: 0.2556
- The information below is about IL_6CZR_155
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8OIS|1|AA|C|615
8OIS|1|AA|G|616
*
8OIS|1|AA|U|682
8OIS|1|AA|C|683
8OIS|1|AA|A|684
8OIS|1|AA|A|685
8OIS|1|AA|G|686
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain Aa
- Peptide chain release factor 1, mitochondrial,mtRF1(AAQ)
- Chain Ad
- 28S ribosomal protein S5, mitochondrial
Coloring options: