IL_8OIS_044
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- ACUU*AUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_044 not in the Motif Atlas
- Geometric match to IL_5TBW_128
- Geometric discrepancy: 0.1598
- The information below is about IL_5TBW_128
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8OIS|1|AA|A|860
8OIS|1|AA|C|861
8OIS|1|AA|U|862
8OIS|1|AA|U|863
*
8OIS|1|AA|A|893
8OIS|1|AA|U|894
8OIS|1|AA|U|895
8OIS|1|AA|U|896
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AD
- Aurora kinase A-interacting protein
- Chain Aj
- 28S ribosomal protein S34, mitochondrial
Coloring options: