IL_8OIT_006
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_006 not in the Motif Atlas
- Homologous match to IL_5J7L_257
- Geometric discrepancy: 0.0991
- The information below is about IL_5J7L_257
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8OIT|1|B8|C|175
8OIT|1|B8|C|176
8OIT|1|B8|U|177
*
8OIT|1|B8|A|186
8OIT|1|B8|U|187
8OIT|1|B8|G|188
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BH
- 39S ribosomal protein L32, mitochondrial
- Chain BN
- 39S ribosomal protein L4, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
Coloring options: