IL_8OO0_197
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 8OO0|1|2|G|874
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OO0_197 not in the Motif Atlas
- Homologous match to IL_4V88_431
- Geometric discrepancy: 0.1493
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8OO0|1|2|C|872
8OO0|1|2|G|873
8OO0|1|2|G|874
8OO0|1|2|G|875
8OO0|1|2|G|876
*
8OO0|1|2|C|948
8OO0|1|2|A|949
8OO0|1|2|A|950
8OO0|1|2|G|951
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain Lc
- 60S ribosomal protein l30-like protein
- Chain SB
- 40S ribosomal protein S1
- Chain SN
- 40S ribosomal protein S13-like protein
- Chain Sa
- 40S ribosomal protein S26
Coloring options: