IL_8OVE_068
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_068 not in the Motif Atlas
- Homologous match to IL_8C3A_459
- Geometric discrepancy: 0.231
- The information below is about IL_8C3A_459
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_63702.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 13
Unit IDs
8OVE|1|AA|C|1695
8OVE|1|AA|G|1696
8OVE|1|AA|G|1697
*
8OVE|1|AA|C|1728
8OVE|1|AA|G|1729
8OVE|1|AA|G|1730
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain AC
- 40S ribosomal protein SA
- Chain AL
- 40S ribosomal protein S17, putative
- Chain AP
- 40S ribosomal protein S2, putative
- Chain AX
- 40S ribosomal protein S3, putative
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