IL_8OVE_077
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGGACC*GCGCAAC
- Length
- 13 nucleotides
- Bulged bases
- 8OVE|1|AA|C|2063
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_077 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.1444
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.3
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
8OVE|1|AA|G|2034
8OVE|1|AA|G|2035
8OVE|1|AA|G|2036
8OVE|1|AA|A|2037
8OVE|1|AA|C|2038
8OVE|1|AA|C|2039
*
8OVE|1|AA|G|2060
8OVE|1|AA|C|2061
8OVE|1|AA|G|2062
8OVE|1|AA|C|2063
8OVE|1|AA|A|2064
8OVE|1|AA|A|2065
8OVE|1|AA|C|2066
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A
- HIS-THR-CYS-THR
- Chain AM
- 40S ribosomal protein S18, putative
- Chain AO
- Ribosomal protein S19, putative
Coloring options: