IL_8OVE_096
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUCAGUCAG*CGAAGAG
- Length
- 16 nucleotides
- Bulged bases
- 8OVE|1|BA|C|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_096 not in the Motif Atlas
- Homologous match to IL_8C3A_006
- Geometric discrepancy: 0.1257
- The information below is about IL_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OVE|1|BA|C|84
8OVE|1|BA|U|85
8OVE|1|BA|C|86
8OVE|1|BA|A|87
8OVE|1|BA|G|88
8OVE|1|BA|U|89
8OVE|1|BA|C|90
8OVE|1|BA|A|91
8OVE|1|BA|G|92
*
8OVE|1|BA|C|100
8OVE|1|BA|G|101
8OVE|1|BA|A|102
8OVE|1|BA|A|103
8OVE|1|BA|G|104
8OVE|1|BA|A|105
8OVE|1|BA|G|106
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BI
- 60S ribosomal protein L18
- Chain BN
- 60S ribosomal protein L13
- Chain BQ
- Ribosomal protein L15
- Chain Bb
- 60S ribosomal protein L27a
- Chain Bt
- 60S ribosomal protein L44
Coloring options: