IL_8OVE_099
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CG*UCG
- Length
- 5 nucleotides
- Bulged bases
- 8OVE|1|BA|C|145
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_099 not in the Motif Atlas
- Geometric match to IL_1DQF_001
- Geometric discrepancy: 0.2927
- The information below is about IL_1DQF_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
8OVE|1|BA|C|128
8OVE|1|BA|G|129
*
8OVE|1|BA|U|144
8OVE|1|BA|C|145
8OVE|1|BA|G|146
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BQ
- Ribosomal protein L15
- Chain Bk
- 60S ribosomal protein L35, putative
- Chain Bx
- 60S ribosomal protein L7a
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