IL_8OVE_126
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_126 not in the Motif Atlas
- Geometric match to IL_5EW4_001
- Geometric discrepancy: 0.2142
- The information below is about IL_5EW4_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_76776.3
- Basepair signature
- cWW-L-R-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8OVE|1|BA|G|648
8OVE|1|BA|U|649
8OVE|1|BA|U|650
8OVE|1|BA|G|651
*
8OVE|1|BA|C|676
8OVE|1|BA|U|677
8OVE|1|BA|U|678
8OVE|1|BA|C|679
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BU
- 60S ribosomal protein L21E, putative
- Chain Br
- 60S ribosomal protein L4
- Chain Bw
- 60S ribosomal protein L7, putative
Coloring options: