IL_8OVE_184
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUAAG*CAAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 8OVE|1|BB|G|115
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_184 not in the Motif Atlas
- Homologous match to IL_8C3A_084
- Geometric discrepancy: 0.075
- The information below is about IL_8C3A_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8OVE|1|BB|C|102
8OVE|1|BB|G|103
8OVE|1|BB|U|104
8OVE|1|BB|A|105
8OVE|1|BB|A|106
8OVE|1|BB|G|107
*
8OVE|1|BB|C|112
8OVE|1|BB|A|113
8OVE|1|BB|A|114
8OVE|1|BB|G|115
8OVE|1|BB|A|116
8OVE|1|BB|A|117
8OVE|1|BB|G|118
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BT
- 60S ribosomal protein L19, putative
- Chain Bo
- 60S ribosomal protein L37a, putative
- Chain Bz
- Ribosomal protein L41
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