IL_8OVE_189
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- U(PSU)C*GGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_189 not in the Motif Atlas
- Geometric match to IL_2ET8_001
- Geometric discrepancy: 0.2215
- The information below is about IL_2ET8_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8OVE|1|BB|U|454
8OVE|1|BB|PSU|455
8OVE|1|BB|C|456
*
8OVE|1|BB|G|579
8OVE|1|BB|G|580
8OVE|1|BB|A|581
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain Be
- 60S ribosomal protein L2, putative
- Chain Bo
- 60S ribosomal protein L37a, putative
- Chain Bz
- Ribosomal protein L41
Coloring options: