IL_8OVE_194
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UCAACG*CCGACG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_194 not in the Motif Atlas
- Geometric match to IL_4V9F_057
- Geometric discrepancy: 0.3492
- The information below is about IL_4V9F_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34822.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OVE|1|BB|U|475
8OVE|1|BB|C|476
8OVE|1|BB|A|477
8OVE|1|BB|A|478
8OVE|1|BB|C|479
8OVE|1|BB|G|480
*
8OVE|1|BB|C|493
8OVE|1|BB|C|494
8OVE|1|BB|G|495
8OVE|1|BB|A|496
8OVE|1|BB|C|497
8OVE|1|BB|G|498
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain AB
- E-SITE TRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Be
- 60S ribosomal protein L2, putative
- Chain Bm
- Ribosomal protein L36, putative
Coloring options: