IL_8OVE_235
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UU*ACA
- Length
- 5 nucleotides
- Bulged bases
- 8OVE|1|BD|C|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_235 not in the Motif Atlas
- Homologous match to IL_5TBW_372
- Geometric discrepancy: 0.3387
- The information below is about IL_5TBW_372
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8OVE|1|BD|U|15
8OVE|1|BD|U|16
*
8OVE|1|BD|A|62
8OVE|1|BD|C|63
8OVE|1|BD|A|64
Current chains
- Chain BD
- 5S rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BK
- 60S ribosomal protein L10, putative
- Chain BL
- 60S ribosomal protein L11, putative
- Chain Bu
- 60S ribosomal protein L5, putative
Coloring options: