IL_8OVE_247
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AUAAU*AAAAAU
- Length
- 11 nucleotides
- Bulged bases
- 8OVE|1|BE|A|149
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_247 not in the Motif Atlas
- Geometric match to IL_5TBW_071
- Geometric discrepancy: 0.2212
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OVE|1|BE|A|68
8OVE|1|BE|U|69
8OVE|1|BE|A|70
8OVE|1|BE|A|71
8OVE|1|BE|U|72
*
8OVE|1|BE|A|145
8OVE|1|BE|A|146
8OVE|1|BE|A|147
8OVE|1|BE|A|148
8OVE|1|BE|A|149
8OVE|1|BE|U|150
Current chains
- Chain BE
- SrRNA 1
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bj
- 60S ribosomal protein L34, putative
- Chain Bp
- 60S ribosomal protein L38, putative
Coloring options: