IL_8OVE_255
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCUCU*AUCG
- Length
- 9 nucleotides
- Bulged bases
- 8OVE|1|BG|U|120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_255 not in the Motif Atlas
- Geometric match to IL_7RQB_104
- Geometric discrepancy: 0.136
- The information below is about IL_7RQB_104
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
8OVE|1|BG|C|75
8OVE|1|BG|C|76
8OVE|1|BG|U|77
8OVE|1|BG|C|78
8OVE|1|BG|U|79
*
8OVE|1|BG|A|119
8OVE|1|BG|U|120
8OVE|1|BG|C|121
8OVE|1|BG|G|122
Current chains
- Chain BG
- SrRNA 2
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- SrRNA 4
- Chain BW
- 60S ribosomal protein L23, putative
- Chain BY
- Ribosomal protein L24
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
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