IL_8OVE_256
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UUUCUG*CGACG
- Length
- 11 nucleotides
- Bulged bases
- 8OVE|1|BG|U|84, 8OVE|1|BG|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_256 not in the Motif Atlas
- Homologous match to IL_5TBW_118
- Geometric discrepancy: 0.2021
- The information below is about IL_5TBW_118
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
8OVE|1|BG|U|82
8OVE|1|BG|U|83
8OVE|1|BG|U|84
8OVE|1|BG|C|85
8OVE|1|BG|U|86
8OVE|1|BG|G|87
*
8OVE|1|BG|C|112
8OVE|1|BG|G|113
8OVE|1|BG|A|114
8OVE|1|BG|C|115
8OVE|1|BG|G|116
Current chains
- Chain BG
- SrRNA 2
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- SrRNA 4
- Chain BY
- Ribosomal protein L24
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
- Chain Bh
- 60S ribosomal subunit protein L31, putative
Coloring options: