IL_8OVE_260
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUG*CUUGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_260 not in the Motif Atlas
- Geometric match to IL_5J7L_340
- Geometric discrepancy: 0.1498
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8OVE|1|BH|C|36
8OVE|1|BH|U|37
8OVE|1|BH|G|38
*
8OVE|1|BH|C|103
8OVE|1|BH|U|104
8OVE|1|BH|U|105
8OVE|1|BH|G|106
8OVE|1|BH|A|107
8OVE|1|BH|U|108
8OVE|1|BH|G|109
Current chains
- Chain BH
- SrRNA 4
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- Ribosomal protein L24
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
- Chain Bh
- 60S ribosomal subunit protein L31, putative
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