IL_8OZ0_021
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8OZ0|1|W|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_021 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.1272
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8OZ0|1|W|G|411
8OZ0|1|W|G|412
8OZ0|1|W|G|413
*
8OZ0|1|W|C|424
8OZ0|1|W|G|425
8OZ0|1|W|A|426
8OZ0|1|W|U|427
8OZ0|1|W|U|428
8OZ0|1|W|C|429
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain Y
- 40S ribosomal protein S4, X isoform
- Chain Z
- 40S ribosomal protein S9
- Chain a
- 40S ribosomal protein S23
Coloring options: