IL_8OZ0_037
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_037 not in the Motif Atlas
- Homologous match to IL_8C3A_428
- Geometric discrepancy: 0.0972
- The information below is about IL_8C3A_428
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.5
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8OZ0|1|W|C|676
8OZ0|1|W|G|677
8OZ0|1|W|U|678
8OZ0|1|W|A|679
8OZ0|1|W|G|680
*
8OZ0|1|W|U|1025
8OZ0|1|W|C|1026
8OZ0|1|W|A|1027
8OZ0|1|W|A|1028
8OZ0|1|W|G|1029
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain V
- 40S ribosomal protein S13
- Chain X
- 40S ribosomal protein S11
- Chain a
- 40S ribosomal protein S23
- Chain c
- 40S ribosomal protein S15a
Coloring options: