IL_8OZ0_094
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAAC*GCUAAUA(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 8OZ0|1|W|U|172
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_094 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.1293
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
8OZ0|1|W|G|145
8OZ0|1|W|G|146
8OZ0|1|W|A|147
8OZ0|1|W|U|148
8OZ0|1|W|A|149
8OZ0|1|W|A|150
8OZ0|1|W|C|151
*
8OZ0|1|W|G|167
8OZ0|1|W|C|168
8OZ0|1|W|U|169
8OZ0|1|W|A|170
8OZ0|1|W|A|171
8OZ0|1|W|U|172
8OZ0|1|W|A|173
8OZ0|1|W|OMC|174
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
- Chain e
- 40S ribosomal protein S24
Coloring options: