IL_8P03_074
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 8P03|1|2|U|1490, 8P03|1|2|G|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P03_074 not in the Motif Atlas
- Homologous match to IL_4V88_451
- Geometric discrepancy: 0.1375
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
8P03|1|2|U|1329
8P03|1|2|G|1330
8P03|1|2|G|1331
*
8P03|1|2|U|1488
8P03|1|2|C|1489
8P03|1|2|U|1490
8P03|1|2|G|1491
8P03|1|2|U|1492
8P03|1|2|G|1493
8P03|1|2|A|1494
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein S3
- Chain M
- 40S ribosomal protein eS10
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
- Chain f
- ribosomal protein eS31
- Chain j
- Eukaryotic translation initiation factor 4C
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