IL_8P03_085
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GUGCCUACC*GUAACC
- Length
- 15 nucleotides
- Bulged bases
- 8P03|1|2|A|1551, 8P03|1|2|A|1575, 8P03|1|2|C|1576
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P03_085 not in the Motif Atlas
- Homologous match to IL_8CRE_463
- Geometric discrepancy: 0.5847
- The information below is about IL_8CRE_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22564.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8P03|1|2|G|1545
8P03|1|2|U|1546
8P03|1|2|G|1547
8P03|1|2|C|1548
8P03|1|2|C|1549
8P03|1|2|U|1550
8P03|1|2|A|1551
8P03|1|2|C|1552
8P03|1|2|C|1553
*
8P03|1|2|G|1572
8P03|1|2|U|1573
8P03|1|2|A|1574
8P03|1|2|A|1575
8P03|1|2|C|1576
8P03|1|2|C|1577
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein S3
- Chain M
- 40S ribosomal protein eS10
- Chain V
- 40S ribosomal protein eS19
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
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