Motif IL_22564.1 Version IL_22564.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-6 | 1-9 | 5-6 | 6-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_463 | 8CRE | 0.0000 | 5 | 180 degree turn (H) | CM | SSU rRNA | G | 1474 | U | 1475 | A | 1478 | G | 1480 | C | 1481 | * | G | 1500 | A | 1501 | A | 1502 | C | 1505 | ntSS | cWW | cWW | |
| 2 | IL_8P9A_449 | 8P9A | 0.6027 | 4 | 180 degree turn (H) | sR | SSU rRNA | G | 1488 | U | 1489 | A | 1492 | A | 1493 | C | 1494 | * | G | 1513 | U | 1514 | A | 1515 | C | 1518 | cWW | cWW | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUAAGC*GAAAUC | 1 |
| GUCUAAC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUAAG*AAAU | 1 |
| UCUAA*UAAU | 1 |
- Annotations
-
- 180 degree turn (H) (2)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.60 | Avg 0.30 | Max 0.60
Coloring options: