IL_8P2K_053
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 8P2K|1|A2|G|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_053 not in the Motif Atlas
- Homologous match to IL_8C3A_438
- Geometric discrepancy: 0.1254
- The information below is about IL_8C3A_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_54697.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 51
Unit IDs
8P2K|1|A2|C|932
8P2K|1|A2|G|933
8P2K|1|A2|G|934
8P2K|1|A2|G|935
8P2K|1|A2|G|936
*
8P2K|1|A2|C|1008
8P2K|1|A2|A|1009
8P2K|1|A2|A|1010
8P2K|1|A2|G|1011
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain AE
- eS26
- Chain Aa
- 40S ribosomal protein S3a
- Chain Am
- 40S ribosomal protein S13
- Chain Bc
- 60S ribosomal protein L30
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