IL_8P2K_066
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8P2K|1|A2|C|1216, 8P2K|1|A2|C|1217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_066 not in the Motif Atlas
- Homologous match to IL_4V88_443
- Geometric discrepancy: 0.1197
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
8P2K|1|A2|A|1215
8P2K|1|A2|C|1216
8P2K|1|A2|C|1217
8P2K|1|A2|A|1218
*
8P2K|1|A2|U|1682
8P2K|1|A2|C|1683
8P2K|1|A2|C|1684
8P2K|1|A2|C|1685
8P2K|1|A2|U|1686
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S28
- Chain AE
- eS26
- Chain AT
- Transfer RNA; tRNA
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- uS9
- Chain At
- 40S ribosomal protein uS10
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