IL_8P2K_077
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUGCU*A(OMG)AGG
- Length
- 11 nucleotides
- Bulged bases
- 8P2K|1|A2|U|1398
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_077 not in the Motif Atlas
- Geometric match to IL_4WF9_084
- Geometric discrepancy: 0.3328
- The information below is about IL_4WF9_084
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8P2K|1|A2|C|1396
8P2K|1|A2|A|1397
8P2K|1|A2|U|1398
8P2K|1|A2|G|1399
8P2K|1|A2|C|1400
8P2K|1|A2|U|1401
*
8P2K|1|A2|A|1447
8P2K|1|A2|OMG|1448
8P2K|1|A2|A|1449
8P2K|1|A2|G|1450
8P2K|1|A2|G|1451
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain AF
- RACK1
- Chain Ap
- uS9
- Chain Aq
- 40S ribosomal protein eS17
- Chain At
- 40S ribosomal protein uS10
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