IL_8P2K_190
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUAGACAG*CCGAA
- Length
- 14 nucleotides
- Bulged bases
- 8P2K|1|B5|A|1899
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_190 not in the Motif Atlas
- Homologous match to IL_5TBW_054
- Geometric discrepancy: 0.1731
- The information below is about IL_5TBW_054
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90538.5
- Basepair signature
- cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
8P2K|1|B5|U|1896
8P2K|1|B5|A|1897
8P2K|1|B5|U|1898
8P2K|1|B5|A|1899
8P2K|1|B5|G|1900
8P2K|1|B5|A|1901
8P2K|1|B5|C|1902
8P2K|1|B5|A|1903
8P2K|1|B5|G|1904
*
8P2K|1|B5|C|1961
8P2K|1|B5|C|1962
8P2K|1|B5|G|1963
8P2K|1|B5|A|1964
8P2K|1|B5|A|1965
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BS
- 60S ribosomal protein L18a
- Chain Bm
- Ubiquitin-60S ribosomal protein L40
- Chain Bs
- 60S acidic ribosomal protein P0
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