#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 131-51-132-124-125-115-136-108-9
1 IL_8C3A_0578C3A0.17701Kink-turn (H)1 LSU rRNAU1214C1215U1216G1218A1219C1220A1221G1222*C1279C1280G1281A1282A1283cWWtsStSHcWW
2 IL_8VTW_0418VTW0.15961Kink-turn (H)1A LSU rRNAC1043G1044A1045G1047A1048C1049A1050G1051*U1108C1109G1110A1111G1112ncsScWWtsStSHtSsncBWcWW
3 IL_5TBW_0545TBW0.13971Kink-turn1 LSU rRNAU1218C1219U1220G1222A1223C1224A1225G1226*C1283C1284G1285A1286A1287ncsScWWntsStSHcWW
4 IL_5J7L_2845J7L0.00001Kink-turnDA LSU rRNAC1043C1044C1045G1047A1048C1049A1050G1051*U1108C1109G1110A1111G1112ncsScWWtsStSHcWW
5 IL_4V9F_0424V9F0.11921Kink-turn0 LSU rRNAC1147C1148U1149G1151A1152C1153A1154G1155*C1212C1213G1214A1215G1216csScWWntsStSHtSscWW
6 IL_5D8H_0015D8H0.28871Kink-turnA LSU rRNAC1153U1154A1155G1157A1158C1159A1160G1161*U1218C1219G1220A1221G1222cWWntsStSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UCUAGACAG*CCGAA2
CGAAGACAG*UCGAG1
CCCAGACAG*UCGAG1
CCUAGACAG*CCGAG1
CUAAGACAG*UCGAG1
Non-Watson-Crick part of the motif
SequenceCounts
CUAGACA*CGA3
GAAGACA*CGA1
CCAGACA*CGA1
UAAGACA*CGA1

Release history

Release3.873.883.89
Date2024-08-142024-09-112024-10-09
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Kink-turn (4)
  • Kink-turn (H) (2)
  • Basepair signature
    cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
    Heat map statistics
    Min 0.12 | Avg 0.19 | Max 0.38
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