IL_8P2K_194
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 8P2K|1|B5|G|2186
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_194 not in the Motif Atlas
- Homologous match to IL_5TBW_057
- Geometric discrepancy: 0.0835
- The information below is about IL_5TBW_057
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- Isolated cWS basepair
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
8P2K|1|B5|C|2133
8P2K|1|B5|G|2134
8P2K|1|B5|C|2135
*
8P2K|1|B5|G|2185
8P2K|1|B5|G|2186
8P2K|1|B5|U|2187
8P2K|1|B5|G|2188
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S ribosomal protein L4
- Chain Ba
- 60S ribosomal protein L27a
- Chain Be
- Ribosomal protein L32
- Chain Br
- 60S ribosomal protein L28
Coloring options: