IL_8P2K_365

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACAU(PSU)U*ACCA(PSU)

Length

11 nucleotides

Bulged bases

8P2K|1|B5|C|4416, 8P2K|1|B5|C|4417

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|A|4370
8P2K|1|B5|C|4371
8P2K|1|B5|A|4372
8P2K|1|B5|U|4373
8P2K|1|B5|PSU|4374
8P2K|1|B5|U|4375
*
8P2K|1|B5|A|4415
8P2K|1|B5|C|4416
8P2K|1|B5|C|4417
8P2K|1|B5|A|4418
8P2K|1|B5|PSU|4419

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BV

Ribosomal protein L23

Chain BW

Ribosomal protein L24