IL_8P2K_365
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACAU(PSU)U*ACCA(PSU)
- Length
- 11 nucleotides
- Bulged bases
- 8P2K|1|B5|C|4416, 8P2K|1|B5|C|4417
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_365 not in the Motif Atlas
- Homologous match to IL_8GLP_317
- Geometric discrepancy: 0.0967
- The information below is about IL_8GLP_317
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31690.2
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
8P2K|1|B5|A|4370
8P2K|1|B5|C|4371
8P2K|1|B5|A|4372
8P2K|1|B5|U|4373
8P2K|1|B5|PSU|4374
8P2K|1|B5|U|4375
*
8P2K|1|B5|A|4415
8P2K|1|B5|C|4416
8P2K|1|B5|C|4417
8P2K|1|B5|A|4418
8P2K|1|B5|PSU|4419
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BV
- Ribosomal protein L23
- Chain BW
- Ribosomal protein L24
Coloring options: