IL_8P4V_356
3D structure
- PDB id
- 8P4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with HaterumaimideQ
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- UUUG*CUUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P4V_356 not in the Motif Atlas
- Homologous match to IL_8P9A_356
- Geometric discrepancy: 0.089
- The information below is about IL_8P9A_356
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
8P4V|1|AR|U|3300
8P4V|1|AR|U|3301
8P4V|1|AR|U|3302
8P4V|1|AR|G|3303
*
8P4V|1|AR|C|3311
8P4V|1|AR|U|3312
8P4V|1|AR|U|3313
8P4V|1|AR|A|3314
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CE
- 60S ribosomal protein L3
- Chain CR
- 60S ribosomal protein L17-A
- Chain DF
- 60S ribosomal protein L31-A
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