IL_8P85_353
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAACG*UUG
- Length
- 8 nucleotides
- Bulged bases
- 8P85|1|AR|U|3259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_353 not in the Motif Atlas
- Geometric match to IL_8P9A_353
- Geometric discrepancy: 0.0394
- The information below is about IL_8P9A_353
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62925.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
8P85|1|AR|C|3225
8P85|1|AR|A|3226
8P85|1|AR|A|3227
8P85|1|AR|C|3228
8P85|1|AR|G|3229
*
8P85|1|AR|U|3258
8P85|1|AR|U|3259
8P85|1|AR|G|3260
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CH
- 60S ribosomal protein L6-A
- Chain CO
- 60S ribosomal protein L14-A
- Chain CQ
- 60S ribosomal protein L16-A
- Chain DH
- 60S ribosomal protein L33-A
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