IL_8P9A_026
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8P9A|1|1|A|933, 8P9A|1|1|G|937
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_026 not in the Motif Atlas
- Homologous match to IL_8P9A_256
- Geometric discrepancy: 0.0389
- The information below is about IL_8P9A_256
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8P9A|1|1|G|805
8P9A|1|1|A|806
8P9A|1|1|A|807
8P9A|1|1|A|808
8P9A|1|1|G|809
*
8P9A|1|1|C|931
8P9A|1|1|U|932
8P9A|1|1|A|933
8P9A|1|1|G|934
8P9A|1|1|U|935
8P9A|1|1|A|936
8P9A|1|1|G|937
8P9A|1|1|C|938
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein L28
- Chain AK
- 60S ribosomal protein L37-A
- Chain l
- 60S ribosomal protein L4-A
- Chain t
- 60S ribosomal protein L13-A
- Chain v
- 60S ribosomal protein L15-A
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