IL_8P9A_120
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8P9A|1|1|A|3130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_120 not in the Motif Atlas
- Homologous match to IL_8P9A_348
- Geometric discrepancy: 0.0505
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8P9A|1|1|A|3103
8P9A|1|1|U|3104
8P9A|1|1|U|3105
8P9A|1|1|A|3106
8P9A|1|1|U|3107
*
8P9A|1|1|A|3127
8P9A|1|1|G|3128
8P9A|1|1|A|3129
8P9A|1|1|A|3130
8P9A|1|1|U|3131
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AN
- Ubiquitin-60S ribosomal protein L40
- Chain q
- 60S ribosomal protein L9-A
- Chain w
- 60S ribosomal protein L16-A
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