IL_8P9A_170
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UA*UAA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_170 not in the Motif Atlas
- Homologous match to IL_8C3A_501
- Geometric discrepancy: 0.2135
- The information below is about IL_8C3A_501
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58310.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
8P9A|1|A|U|517
8P9A|1|A|A|518
*
8P9A|1|A|U|533
8P9A|1|A|A|534
8P9A|1|A|A|535
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain K
- 40S ribosomal protein S9-A
- Chain Z
- 40S ribosomal protein S24-A
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