IL_8P9A_194
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGUG*CCCA
- Length
- 9 nucleotides
- Bulged bases
- 8P9A|1|A|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_194 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.2743
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8P9A|1|A|U|1049
8P9A|1|A|G|1050
8P9A|1|A|G|1051
8P9A|1|A|U|1052
8P9A|1|A|G|1053
*
8P9A|1|A|C|1066
8P9A|1|A|C|1067
8P9A|1|A|C|1068
8P9A|1|A|A|1069
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- 40S ribosomal protein S0-A
- Chain C
- 40S ribosomal protein S1-A
- Chain S
- 40S ribosomal protein S17-A
- Chain c
- 40S ribosomal protein S27-A
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