IL_8P9A_211
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAC*GAG
- Length
- 7 nucleotides
- Bulged bases
- 8P9A|1|A|U|1340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_211 not in the Motif Atlas
- Homologous match to IL_8P9A_444
- Geometric discrepancy: 0.1347
- The information below is about IL_8P9A_444
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
8P9A|1|A|C|1339
8P9A|1|A|U|1340
8P9A|1|A|A|1341
8P9A|1|A|C|1342
*
8P9A|1|A|G|1383
8P9A|1|A|A|1384
8P9A|1|A|G|1385
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein S16-A
- Chain S
- 40S ribosomal protein S17-A
- Chain V
- Small ribosomal subunit protein uS10
- Chain h
- Guanine nucleotide-binding protein subunit beta-like protein
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