IL_8PJ5_090

3D structure

PDB id

8PJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

8PJ5|1|A|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ5|1|A|C|1708
8PJ5|1|A|G|1709
8PJ5|1|A|C|1710
8PJ5|1|A|U|1711
*
8PJ5|1|A|A|1822
8PJ5|1|A|A|1823
8PJ5|1|A|A|1824
8PJ5|1|A|A|1825
8PJ5|1|A|G|1826

Current chains

Chain A

18S rRNA

Nearby chains

Chain 7

mRNA

Chain 9

60S ribosomal protein L41

Chain E

40S ribosomal protein S23

Chain b

40S ribosomal protein S15

Chain q

Eukaryotic translation initiation factor 1A, X-chromosomal