IL_8PV7_132
3D structure
- PDB id
- 8PV7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.12 Å
Loop
- Sequence
- GUC*GUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 8PV7|1|C1|G|3318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PV7_132 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.0608
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8PV7|1|C1|G|3269
8PV7|1|C1|U|3270
8PV7|1|C1|C|3271
*
8PV7|1|C1|G|3314
8PV7|1|C1|U|3315
8PV7|1|C1|A|3316
8PV7|1|C1|A|3317
8PV7|1|C1|G|3318
8PV7|1|C1|C|3319
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain CQ
- Ribosome biogenesis protein RLP24
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain Ld
- Putative 60S ribosomal protein
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