IL_8PV8_067
3D structure
- PDB id
- 8PV8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- UUUGC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 8PV8|1|C1|U|1609, 8PV8|1|C1|U|1795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PV8_067 not in the Motif Atlas
- Homologous match to IL_8C3A_072
- Geometric discrepancy: 0.2484
- The information below is about IL_8C3A_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8PV8|1|C1|U|1607
8PV8|1|C1|U|1608
8PV8|1|C1|U|1609
8PV8|1|C1|G|1610
8PV8|1|C1|C|1611
*
8PV8|1|C1|G|1791
8PV8|1|C1|G|1792
8PV8|1|C1|A|1793
8PV8|1|C1|A|1794
8PV8|1|C1|U|1795
8PV8|1|C1|A|1796
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain LZ
- 60S ribosomal protein L27
- Chain Lr
- 60S ribosomal protein L41-A
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