IL_8Q4F_199
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACAAUG*UGAU
- Length
- 10 nucleotides
- Bulged bases
- 8Q4F|1|A|G|388
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q4F_199 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.2299
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8Q4F|1|A|A|371
8Q4F|1|A|C|372
8Q4F|1|A|A|373
8Q4F|1|A|A|374
8Q4F|1|A|U|375
8Q4F|1|A|G|376
*
8Q4F|1|A|U|387
8Q4F|1|A|G|388
8Q4F|1|A|A|389
8Q4F|1|A|U|390
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- Small ribosomal subunit protein bS16
Coloring options: