IL_8Q5I_031
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8Q5I|1|1|G|904, 8Q5I|1|1|A|916, 8Q5I|1|1|A|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_031 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.0777
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8Q5I|1|1|G|903
8Q5I|1|1|G|904
8Q5I|1|1|G|905
*
8Q5I|1|1|U|915
8Q5I|1|1|A|916
8Q5I|1|1|A|917
8Q5I|1|1|U|918
8Q5I|1|1|C|919
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AK
- 60S ribosomal protein L37-B
- Chain j
- 60S ribosomal protein L2-B
- Chain v
- 60S ribosomal protein L15-A
- Chain x
- Ribosomal protein L22
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